I am currently working on WSUS (windows software update services) here at work, for the most part I’m following this excellent article at Ars. After screwing around with this for much longer than I should have, I was having issues with about half the servers not showing up in the WSUS console. Many things could have been the culprit and I checked them all.. group policy, dns, firewall rules, etc. What was the most frustrating was that I could see the clients touch the WSUS server by looking in the IIS logs, and there were no errors whatsoever, but half the servers wouldn’t show up.
Eventually I realized that it was exactly half of the servers and a light bulb went off. In our environment we have a bunch of web and app servers that are all virtual, and when we build them, we get the first node working right, and then clone and rename the vm to be the redundant node in the farm.This lead me to do some searching and I found this link. Admittedly, this is an old problem, but the first time I have run across it.
The following is a repost of the pertinent bits that have caused my trouble and are the resolution for it.